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brew setup:
- Setup .zprofile
  Code Block
  # Set PATH, MANPATH, etc., for Homebrew. eval "$(/opt/homebrew/bin/brew shellenv)" export PATH=/Users/mbodkin/.local/bin:$PATH
- Install the following Packages. Note this list is attached file.
- Development Font Setup:
  - brew tap homebrew/cask-fonts
  - brew install --cask font-source-code-pro
- Dart Setup
  - brew install dart
  - brew install dart@2.14
  - brew unlink dart && brew unlink dart@2.14 && brew link dart@2.14
  - dart pub global activate webdev
Iterm2 Setup:
- Install Iterm2 App: Download from here https://iterm2.com/
- Fix LVIM backspace issue
  - curl -LO https://invisible-island.net/datafiles/current/terminfo.src.gz && gunzip terminfo.src.gz see attachments.
  - sudo /usr/bin/tic -xe tmux-256color terminfo.src
  - set -g default-terminal "xterm-256color"
  - Modify Default Font: Iterm2 → Settings → Select “Profile” Tab → Select “Default” profile name → Select “Text” tab → Select “Source Code Pro” as the “Font” three from bottom.

Zshell Setup:

Install Oh my shell (https://ohmyz.sh/ ): sh -c "$(wget https://raw.github.com/ohmyzsh/ohmyzsh/master/tools/install.sh -O -)

My zshrc:

Set theme to gnzh:ZSH_THEME="gnzh"

Add the following:

Code Block

alias docker=podman
set -o vi

#THIS MUST BE AT THE END OF THE FILE FOR SDKMAN TO WORK!!!
export SDKMAN_DIR="$HOME/.sdkman"
[[ -s "$HOME/.sdkman/bin/sdkman-init.sh" ]] && source "$HOME/.sdkman/bin/sdkman-init.sh"

export SUNWAVE_HOME=~/.config/sunwave/


export PATH="$PATH":"$HOME/.pub-cache/bin"

LunarVim Setup:
- Installation: LV_BRANCH='release-1.2/neovim-0.8' bash <(curl -s https://raw.githubusercontent.com/lunarvim/lunarvim/master/utils/installer/install.sh)
- Add python module: python3 -m pip install neovim
Sdkman Setup for managing java and maven ()
- Install
  - curl -s "https://get.sdkman.io" | bash
  - source "$HOME/.sdkman/bin/sdkman-init.sh"
- Setup Java and mvn
  - sdk list java
  - sdk install java-8.0.352-amzn
  - Install the latest mvn version that supports Java 8: sdk install maven

Git

Install Github Desktop App: https://desktop.github.com/

Configure:

Get line endding right for mac: git config --global core.autocrlf input
Use lvim for editing comments: git config --global core.editor lvim
Make “less” more friendly on logs and diff runs: git config --global core.pager "less --LONG-PROMPT --tabs=3 --quit-at-eof --quit-if-one-screen --tilde --jump-target=3 --ignore-case --status-column"

My git config:

Code Block

[filter "lfs"]
	clean = git-lfs clean -- %f
	smudge = git-lfs smudge -- %f
	process = git-lfs filter-process
	required = true
[user]
	name = Michael Bodkin
	email = michael.bodkin@sunwavehealth.com
[core]
	autocrlf = input
	editor = lvim
	pager = less --LONG-PROMPT --tabs=3 --quit-at-eof --quit-if-one-screen --tilde --jump-target=3 --ignore-case --status-column

Info Large File Storage (lfs filter): https://shuhrat.github.io/programming/git-lfs-tips-and-tricks.html

Intellij Setup
- Plugin Setup (Intellij → Perferences → Plugins)
  - Add AWSTookit, Dart, Checkstyle-IDEA, and IDeaVim
- Zooming in and out with scrollwheel (Preferences → Editor → General → Change font size with Command+Mouse Wheel) https://www.jetbrains.com/idea/guide/tutorials/presenting/mouse-zoom/
Podman Setup:
- Install: brew install podman
- Mysql Database setup
  - docker volume create db_dump20220714
  - docker run -p 13306:3306 --platform linux/amd64 --mount type=volume,src=db_dump20220714,target=/var/lib/mysql --name mysql -e MYSQL_ROOT_PASSWORD=Welcome1 -d mysql:5.6.51 --lower_case_table_names=1
  - docker exec -i mysql sh -c "exec mysql -uroot -pPassword1! -e 'create database sunwave3;'"
  - docker exec -i mysql sh -c "exec mysql -uroot -pPassword1! sunwave3" < Dump20220714.sql
  - docker exec -i mysql sh -c "exec mysql -uroot -pWelcome1 sunwave3" < hack.sql

SunwaveEMR Setup:

IntelliJ
- Run Config
  Image Added
- Deployment - Note “Application Context: /SunwaveEMR"
  Image Added
- Edit Deployment
  Image Added
- Logs - Choose all so they show up in IntelliJ
  Image Added
- Startup Shutdown Point to Tomcat home directory.
  Image Added

config.properties see attachments.

Code Block

language	java

#SFb8TVhuMAh6tgE sw
#App Info
appName="Sunwave ERM"

mail.support.username=daniel.fernandez@sunwavehealth.com 
mail.support.password=xxx

api_key=1234567890

##Stripe
#days for wait before show verification form
daysBeforeVerification = 2
secretStripeKey = sk_test_HzSHs8Fg7lQQtk1IOlmitd3U
publishableStripeKey = pk_test_Lb8tJqBEyDJFDXhhtuZ42Pg8
authorize_net_url=https://apitest.authorize.net/xml/v1/request.api

#CMS 1500 form
cms1500.path = /Users/mbodkin/.config/sunwave/DATA/nosql/CMS1500-0212-MDCW.pdf
#UF04
ub04.path = /Users/mbodkin/.config/sunwave/DATA/nosql/ub04_interactive.pdf

useJNDI=false
jdbcURL=jdbc:mysql://localhost:3306/sunwave3?user=root&password=Welcome1&zeroDateTimeBehavior=convertToNull
production=false
basePath=/Users/mbodkin/.config/sunwave/DATA/nosql

GOOGLE_CALENDAR_API_KEY=AIzaSyBN6FQnCwXg7YYdGajycVVSOI2wVZ2Dlac
GOOGLE_CALENDAR_CLIENT_ID=7726274540401-lmh7p4utod4l5k80vgv9kpejpnau4gub.apps.googleusercontent.com
GOOGLE_CALENDAR_CLIENT_SECRET=UTA4hrZ_xmGkYlRTudhHcXYp
GOOGLE_CALENDAR_REDIREC_URL=/SunwaveEMR/Processor/googleCalendarApi

useS3=false
bucketName=sunwave.s3.bucket01

intuit_oAuth2AppClientId = ABiGZkBQjZrj30Fl6oY8kQ74st4yO39r1dhJ1IBV9lwZ6mO5GE
intuit_oAuth2AppClientSecret = BgGCN764FezZX8PZYcjgc9Q6yZe1TH6rB93v0crZ
intuit_oAuth2AppRedirectUri = https://localhost:8443/SunwaveEMR/Processor/intuitIntegrationProcessor/?method=oauth2redirect
intuit_intuitAccountingAPIHost = https://sandbox-quickbooks.api.intuit.com
intuit_discoveryAPIHost = https://developer.api.intuit.com/.well-known/openid_sandbox_configuration/

GOOGLE_GMAIL_AUTH_URI=https://accounts.google.com/o/oauth2/auth
GOOGLE_GMAIL_TOKEN_URI=https://oauth2.googleapis.com/token
GOOGLE_GMAIL_REDIRECT_URI=https://localhost:8443/SunwaveEMR/Processor/emailGoogleOAuth2Processor/?method=oauth2redirect
#GOOGLE_GMAIL_CLIENT_ID=593886932269-7hel7eg14vgbkvl0f3ac8frlgi19ae29.apps.googleusercontent.com
#GOOGLE_GMAIL_SECRET=vXu6XMRG3LfQhfHGpZ9WYXvU
#GOOGLE_GMAIL_CLIENT_ID=559573570591-6iakfoe9k4fclt22614hafjtebjvukc5.apps.googleusercontent.com
#GOOGLE_GMAIL_SECRET=sEFdB5wid8VxuzPmaGcVYCup
#sunwave data
GOOGLE_GMAIL_CLIENT_ID=922325029689-6jni457s2ppjr827hhd2ilkk6l2e7fok.apps.googleusercontent.com
GOOGLE_GMAIL_SECRET=HBTRTbS0MTuH1Za3mGTMhGdy


MICROSOFT_OUTLOOK_CLIENT_ID=e339f42c-7fec-4a33-9754-50f8251d2e4d
MICROSOFT_OUTLOOK_SECRET=9fF-2bV_eM5.meQ69QYt-82xLLz2-Wd495
MICROSOFT_OUTLOOK_REDIRECT_URI=https://localhost:8443/SunwaveEMR/Processor/emailMicrosoftOAuth2Processor/
MICROSOFT_OUTLOOK_TOKEN_URI=https://login.microsoftonline.com/common/oauth2/v2.0/token
MICROSOFT_OUTLOOK_AUTH_URI=https://login.microsoftonline.com/common/oauth2/v2.0/authorize

#https://login.microsoftonline.com/

#CERTIFICATION Env
QUEST_ORDER_DOCUMENT_ENDPOINT=https://cert.hub.Care360.com/rest/orders/v1/document
#PRODUCTION Env.
#QUEST_ORDER_DOCUMENT_ENDPOINT=https://hubservices.medplus.com/rest/orders/v1/document

#Quest Retrieval, CERTIFICATION Env    getResults|acknowledgeResults 
QUEST_RETRIEVAL_RESULTS_ENDPOINT=https://cert.hub.Care360.com/rest/results/v1/retrieval
#Quest Retrieval, PRODUCTION Env
#QUEST_RETRIEVAL_RESULTS_ENDPOINT=https://hubservices.medplus.com/rest/results/v1/retrieval

#Quest Test Code Retrieval, CERTIFICATION Env 
QUEST_TEST_CODE_ENDPOINT=https://cert.hub.care360.com/webdav/cdc
#Quest Test Code Retrieval, PRODUCTION Env
#QUEST_TEST_CODE_ENDPOINT=https://hubservices.MedPlus.com/webdav/cdc

MAX_FORM_NUMBER_PER_EXPORTED_PDF=10

server_name=MyLocal

medical_records_export_server=localhost:8443
#dev
LABCORP_ABN_ENDPOINT=https://emrsvcs-stage.labcorpbeacon.com:7360/emr-service/services
#prod
#LABCORP_ABN_ENDPOINT=https://emrsvcs.labcorpbeacon.com:7360/emr-service/services

LABCORP_ABN_USERNAME=emrt_sunwavehlth
LABCORP_ABN_PASSWORD=k2WakJZK

CONCURRENT_MANAGER_SERVER=true
eprescribe_url=https://engine201.staging.drfirst.com/servlet/rcopia.servlet.EngineServlet
#              https://update201.staging.drfirst.com/servlet/rcopia.servlet.EngineServlet
eprescribe_sso_url=https://web.staging.drfirst.com/sso/portalServices?

MEDIK_ONLINE_ENDPOINT=https://medikonlinews.test.medikonline.com

SYMMETRIC_ENCRYPTION_KEY=123

telehealth_url=https://localhost:8443
env_host=https://localhost:8443
server_name=uat

server.xml see attachments.

Code Block

<?xml version="1.0" encoding="UTF-8" ?>
<!--   
  Licensed to the Apache Software Foundation (ASF) under one or more
  contributor license agreements.  See the NOTICE file distributed with
  this work for additional information regarding copyright ownership.
  The ASF licenses this file to You under the Apache License, Version 2.0
  (the "License"); you may not use this file except in compliance with
  the License.  You may obtain a copy of the License at

      http://www.apache.org/licenses/LICENSE-2.0

  Unless required by applicable law or agreed to in writing, software
  distributed under the License is distributed on an "AS IS" BASIS,
  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  See the License for the specific language governing permissions and
  limitations under the License.
-->
<!-- Note:  A "Server" is not itself a "Container", so you may not
     define subcomponents such as "Valves" at this level.
     Documentation at /docs/config/server.html
 -->
<Server port="8005" shutdown="SHUTDOWN">
  <Listener className="org.apache.catalina.startup.VersionLoggerListener" />
  <!-- Security listener. Documentation at /docs/config/listeners.html
  <Listener className="org.apache.catalina.security.SecurityListener" />
  -->
  <!--APR library loader. Documentation at /docs/apr.html -->
  <Listener className="org.apache.catalina.core.AprLifecycleListener" SSLEngine="on" />       
  <!-- Prevent memory leaks due to use of particular java/javax APIs-->
  <Listener className="org.apache.catalina.core.JreMemoryLeakPreventionListener" />
  <Listener className="org.apache.catalina.mbeans.GlobalResourcesLifecycleListener" />
  <Listener className="org.apache.catalina.core.ThreadLocalLeakPreventionListener" />

  <!-- Global JNDI resources
       Documentation at /docs/jndi-resources-howto.html
  -->
  <GlobalNamingResources>
    <!-- Editable user database that can also be used by
         UserDatabaseRealm to authenticate users    
    <Resource name="UserDatabase" auth="Container"
              type="org.apache.catalina.UserDatabase"
              description="User database that can be updated and saved"
              factory="org.apache.catalina.users.MemoryUserDatabaseFactory"
              pathname="conf/tomcat-users.xml" />
	-->		  
			  
	<Resource  name="jdbc/sunwave"
		   auth="Container" 
		   type="javax.sql.DataSource"
		   username="root" 
		   password="Welcome1" 
		   driverClassName="com.mysql.jdbc.Driver"
		   url="jdbc:mysql://localhost:3306/sunwave3?verifyServerCertificate=false&amp;useSSL=false&amp;requireSSL=false&amp;zeroDateTimeBehavior=convertToNull"
		   defaultAutoCommit="false"		   
		    maxActive="10"
			logAbandoned="true"
			maxIdle="5"
			validationQuery="select 1"
		   
	/>
	
	 <Resource  name="jdbc/cm"
		   auth="Container" 
		   type="javax.sql.DataSource"
		   username="root" 
		   password="Welcome1" 
		   driverClassName="com.mysql.jdbc.Driver"
		   url="jdbc:mysql://localhost:3306/quartz?verifyServerCertificate=false&amp;useSSL=false&amp;requireSSL=false"
		   defaultAutoCommit="false"		   
		    maxActive="20"
			maxIdle="10"
			validationQuery="select 1"
		   
	/> 
	
	<!-- 
	
	Other params
	
	   maxTotal="100" 
		   maxWaitMillis="10000"
		   maxActive="15"
		   maxIdle="10"
		   maxWait="5000"
		   removeAbandoned="true"
		   removeAbandonedTimeout="20"
		   logAbandoned="true"
		   factory="org.apache.tomcat.jdbc.pool.DataSourceFactory"
		   validationQuery="select 1"
		   minEvictableIdleTimeMillis="3600000"
		   timeBetweenEvictionRunsMillis="1800000"
		   numTestsPerEvictionRun="10"
		   testWhileIdle="true"
		   testOnBorrow="true"
		   testOnReturn="false"
		   
	-->
		   
  </GlobalNamingResources>

  <!-- A "Service" is a collection of one or more "Connectors" that share
       a single "Container" Note:  A "Service" is not itself a "Container",
       so you may not define subcomponents such as "Valves" at this level.
       Documentation at /docs/config/service.html
   -->
  <Service name="Catalina">

    <!--The connectors can use a shared executor, you can define one or more named thread pools-->
    <!--
    <Executor name="tomcatThreadPool" namePrefix="catalina-exec-"
        maxThreads="150" minSpareThreads="4"/>
    -->


    <!-- A "Connector" represents an endpoint by which requests are received
         and responses are returned. Documentation at :
         Java HTTP Connector: /docs/config/http.html
         Java AJP  Connector: /docs/config/ajp.html
         APR (HTTP/AJP) Connector: /docs/apr.html
         Define a non-SSL/TLS HTTP/1.1 Connector on port 8080
    -->
	
    <Connector port="8079" protocol="HTTP/1.1"
               connectionTimeout="20000"
               redirectPort="8443" />
			   
<!--			   
	<Connector 
		SSLEnabled="true" 
		acceptCount="800" 
		clientAuth="false"
		disableUploadTimeout="true" 
		enableLookups="false" 
		maxThreads="300"
		port="8443" 
		keystoreFile="${user.home}\.keystore" 
		keystorePass="santiago"
		protocol="org.apache.coyote.http11.Http11NioProtocol" 
		scheme="https"
		secure="true" 
		sslProtocol="TLS" />	
		
-->
	
<Connector 
	port="8443" 
	maxThreads="150" 
	scheme="https" 
	secure="true" 
	SSLEnabled="true" 
  keystoreFile="/Users/mbodkin/.config/sunwave/keys/server.p12" 
	keystorePass="password" 
	keystoreType="PKCS12" 
	clientAuth="false" 
	keyAlias="tomcat" 
  sslProtocol="TLS"
  useSendfile="false"
  compression="force"
  compressionMinSize="1024"
/>	


<!--
<Connector
       protocol="org.apache.coyote.http11.Http11AprProtocol"
       port="8443" 
	   maxThreads="200"
       scheme="https" 
	   secure="true" 
	   SSLEnabled="true"
       SSLCertificateFile="C:/temp/openssl/server.crt" 
       SSLCertificateKeyFile="C:/temp/openssl/server.pem"
       SSLVerifyClient="optional" 
	   SSLProtocol="TLSv1+TLSv1.1+TLSv1.2"/>
-->		
		
		
    <!-- A "Connector" using the shared thread pool-->
    <!--
    <Connector executor="tomcatThreadPool"
               port="8080" protocol="HTTP/1.1"
               connectionTimeout="20000"
               redirectPort="8443" />
    -->
    <!-- Define a SSL/TLS HTTP/1.1 Connector on port 8443
         This connector uses the NIO implementation. The default
         SSLImplementation will depend on the presence of the APR/native
         library and the useOpenSSL attribute of the
         AprLifecycleListener.
         Either JSSE or OpenSSL style configuration may be used regardless of
         the SSLImplementation selected. JSSE style configuration is used below.
    -->
    <!--
    <Connector port="8443" protocol="org.apache.coyote.http11.Http11NioProtocol"
               maxThreads="150" SSLEnabled="true">
        <SSLHostConfig>
            <Certificate certificateKeystoreFile="conf/localhost-rsa.jks"
                         type="RSA" />
        </SSLHostConfig>
    </Connector>
    -->
    <!-- Define a SSL/TLS HTTP/1.1 Connector on port 8443 with HTTP/2
         This connector uses the APR/native implementation which always uses
         OpenSSL for TLS.
         Either JSSE or OpenSSL style configuration may be used. OpenSSL style
         configuration is used below.
    -->
    <!--
    <Connector port="8443" protocol="org.apache.coyote.http11.Http11AprProtocol"
               maxThreads="150" SSLEnabled="true" >
        <UpgradeProtocol className="org.apache.coyote.http2.Http2Protocol" />
        <SSLHostConfig>
            <Certificate certificateKeyFile="conf/localhost-rsa-key.pem"
                         certificateFile="conf/localhost-rsa-cert.pem"
                         certificateChainFile="conf/localhost-rsa-chain.pem"
                         type="RSA" />
        </SSLHostConfig>
    </Connector>
    -->

    <!-- Define an AJP 1.3 Connector on port 8009 -->
    <Connector port="8009" protocol="AJP/1.3" redirectPort="8443" />


    <!-- An Engine represents the entry point (within Catalina) that processes
         every request.  The Engine implementation for Tomcat stand alone
         analyzes the HTTP headers included with the request, and passes them
         on to the appropriate Host (virtual host).
         Documentation at /docs/config/engine.html -->

    <!-- You should set jvmRoute to support load-balancing via AJP ie :
    <Engine name="Catalina" defaultHost="localhost" jvmRoute="jvm1">
    -->
    <Engine name="Catalina" defaultHost="localhost">

      <!--For clustering, please take a look at documentation at:
          /docs/cluster-howto.html  (simple how to)
          /docs/config/cluster.html (reference documentation) -->
      <!--
      <Cluster className="org.apache.catalina.ha.tcp.SimpleTcpCluster"/>
      -->

      <!-- Use the LockOutRealm to prevent attempts to guess user passwords
           via a brute-force attack -->
	   
	  <Realm 
		className="org.apache.catalina.realm.DataSourceRealm" 
		dataSourceName="jdbc/sunwave"
		userTable="mb2_user" 
		userNameCol="EMAIL" 
		userCredCol="TM_PASSWORD"
		userRoleTable="mb2_user_group" 
		roleNameCol="GROUP_NAME" >
		
		<CredentialHandler
          className="org.apache.catalina.realm.MessageDigestCredentialHandler"     
		  algorithm="SHA-256"  
		  iterations="1" 
		  saltLength="0" 
		/>
		

		<!-- digest -a SHA-256 -s 0 santiago    encoding="ISO-8859-1"  
		com.sunwave.emr.server.util.PasswordComparator   -->
	</Realm>
 
	  

      <Host name="localhost"  appBase="webapps"
            unpackWARs="true" autoDeploy="true">

        <!-- SingleSignOn valve, share authentication between web applications
             Documentation at: /docs/config/valve.html -->
        <!-- -->
        <Valve className="org.apache.catalina.authenticator.SingleSignOn" />
        

        <!-- Access log processes all example.
             Documentation at: /docs/config/valve.html
             Note: The pattern used is equivalent to using pattern="common" -->
        <Valve className="org.apache.catalina.valves.AccessLogValve" directory="logs"
               prefix="localhost_access_log" suffix=".txt"
               pattern="%h %l %u %t &quot;%r&quot; %s %b" />

      </Host>
    </Engine>
  </Service>
</Server>

Dart
WebContext

Aws Setup:
- Config
- Usage
Security Setup
- gnugp
- Firewall
- Password Rules required for handling HIPAA info.

Version	Old Version 21	New Version Current
Changes made by	Michael Bodkin (Unlicensed)	Michael Bodkin (Unlicensed)
Saved on	Nov 15, 2022	May 17, 2023

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